dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02646
Location and strand information: 15975 - 17645 (+)
Family: GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43B
Protein isoelectric point: 4.4122
Protein molecular weight: 63197.12
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02647
Location and strand information: 17755 - 18033 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02648
Location and strand information: 18322 - 18561 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02649
Location and strand information: 18779 - 20476 (+)
Family: 3.A.1.5.1
Protein type: TC
Protein description: Periplasmic murein peptide-binding protein

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02650
Location and strand information: 20561 - 21535 (+)
Family: 3.A.1.5.11
Protein type: TC
Protein description: Glutathione transport system permease protein GsiC

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02651
Location and strand information: 21548 - 22456 (+)
Family: 3.A.1.5.11
Protein type: TC
Protein description: Glutathione transport system permease protein GsiD

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02652
Location and strand information: 22472 - 23461 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02653
Location and strand information: 23454 - 24416 (+)
Family: 3.A.1.5.20
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02654
Location and strand information: 24430 - 25977 (+)
Family: null
Protein type: null
Protein description: Para-nitrobenzyl esterase

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02655
Location and strand information: 26251 - 28674 (+)
Family: GH39
Protein type: CAZyme
Protein description: HTH-type transcriptional activator RhaS
Protein isoelectric point: 5.976
Protein molecular weight: 95745.81
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000268_20|CGC1
Gene ID: MGYG000000268_02656
Location and strand information: 28935 - 30350 (+)
Family: 2.A.2.3.3
Protein type: TC
Protein description: Isoprimeverose transporter

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000268_02646	Non-reducing end alpha-L-arabinofuranosidase BoGH43B	CAZyme	15975	17645	+	GH43_12
MGYG000000268_02647	hypothetical protein	null	17755	18033	-	ABM
MGYG000000268_02648	hypothetical protein	null	18322	18561	+	No domain
MGYG000000268_02649	Periplasmic murein peptide-binding protein	TC	18779	20476	+	3.A.1.5.1
MGYG000000268_02650	Glutathione transport system permease protein GsiC	TC	20561	21535	+	3.A.1.5.11
MGYG000000268_02651	Glutathione transport system permease protein GsiD	TC	21548	22456	+	3.A.1.5.11
MGYG000000268_02652	Oligopeptide transport ATP-binding protein OppD	TC	22472	23461	+	3.A.1.5.20
MGYG000000268_02653	Oligopeptide transport ATP-binding protein OppF	TC	23454	24416	+	3.A.1.5.20
MGYG000000268_02654	Para-nitrobenzyl esterase	null	24430	25977	+	COesterase
MGYG000000268_02655	HTH-type transcriptional activator RhaS	CAZyme	26251	28674	+	GH39
MGYG000000268_02656	Isoprimeverose transporter	TC	28935	30350	+	2.A.2.3.3
Protein ID	Protein Name	Type	Start	End	Strand	Signature